The controversial penalty was given when Crewe right back David Wright was adjudged to have pushed Foxes midfielder Jordan Stewart over when appearing to innocently shield the ball out of play.
Baker said: "It looked as though the ball was running out of play, and he (Wright) was shielding it out. Whether he gave him a nudge or not, I don't know, but it looked a poor decision, and for David's sake, I hope it is.
"It didn't look a penalty from where we were, the referee has adjudged him to have tugged the lads shirt. There might have been a little nudge but its unfair to judge without looking at the video."
Skipper Dave Brammer was equally downbeat: "Well we were disappointed with it and we didn't think many of their players appealed. It it was frustrating because I thought we did quite well tonight."